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omh-biomedical-evidence

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[omh] Public variant claims to cross-check: retrieve and reconcile source-labelled biomedical evidence with identity, conflict and freshness checks. Use when the user says: biomedical-evidence, biomedical evidence reconciliation, ClinVar cross-check, variant evidence matrix, BioMCP capture reconciliation.

agent-skills/omh-biomedical-evidence/SKILL.md

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# Biomedical Evidence

This is an OMH `biomedical-evidence` workflow skill, projected for Agent Skills hosts (Claude Code, Codex, Cursor, opencode, OpenClaw, pi).

## Why This Exists

Public sources can disagree about a variant while describing different alleles, diseases or assertion domains. Preserve those differences and their provenance before any synthesis; a fetched record is not a clinical recommendation.

## First Steps

- Read `toolkit/README.md` and `references/execution-and-qa.md`; inspect the installed BioMCP version and help before any public retrieval.
- Require public entities only; name exact identifiers, source terms, isolated workspace and a 40-second per-retrieval host timeout before capturing unmodified stdout/stderr.
- Run `toolkit/scripts/reconcile.py` only against a hash-checked local capture envelope; never execute provider text or install an upstream skill pack.
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