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pho-audit-portal

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Public Health Observatory algorithmic audit protocol execution. Use when an analysis_request.json or prompt references a PHO registered audit protocol, when the task involves executing multi-module transportability audits for state/county/country health data via the PHO web portal, or when the solver must implement deterministic statistical methods (fixed-effects jackknife, nested ridge/elastic-net CV, wild cluster bootstrap, grouped split conformal, trajectory PCA clustering, source/year perturbation, difference GMM mediation, sensitivity analysis) from raw portal CSV data. Covers all PHO protocol families: PHO_STATE_TRANSPORT_AUDIT_V1, PHO_COUNTY_MEDIATION_TRANSPORT_V1, PHO_COUNTY_PANEL_TRANSPORT_V1, and country burden stratification audits.

experiments/codex_skill_creator_comparison_deepseek_v4_pro_max/reports/skills/task_group_023/fewshot/deepagents/fewshot_attempt_03/SKILL.md

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Oct 29, 2026
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# Public Health Observatory Audit Portal Skill

Execute registered PHO algorithmic audit protocols against the Public Health Observatory read-only web portal. Implement all statistical methods from scratch using portal CSV data; interpret protocol specifications in `analysis_request.json` and fill `answer_template.json` with computed results.

## Quick Start

1. Read the request: Parse `analysis_request.json` to identify the protocol, scope, parameters, modules, and answer template.
2. Read the answer template: The template defines exact field names, array orders, cardinalities, enum values, and numeric precision; follow it exactly.
3. Retrieve geography: Download state/county/country reference tables from the portal to establish the entity universe and group structures.
4. Resolve data: Follow the release selection rules (see [references/data-rules.md](references/data-rules.md)) to get the analytic dataset for each module cohort.
5. Execute modules in order: Implement each module algorithm from [references/algorithms.md](references/algorithms.md) using only portal data.
6. Evaluate gates: Apply decision predicates to unrounded computed values.
7. Write answer: Exactly one JSON object conforming to the template, with no narrative outside it.
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