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synthetic-clinic-protocol-json

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Build protocol-bound JSON answers for synthetic clinic runtime tasks. Use when a prompt asks Codex to query a clinic task environment and return a structured answer_template JSON for cases involving FHIR-like patients, cases, observations, medications, allergies, problems, imaging, SDOH, care registry, respiratory CAP assessment, pediatric head injury triage, potassium replacement, observation-window gates, or care-management routing.

experiments/codex_skill_creator_comparison_gpt5_5_xhigh/reports/skills/task_group_016/fewshot/codex/fewshot_attempt_03/SKILL.md

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Oct 29, 2026
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Apache-2.0

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# Synthetic Clinic Protocol JSON

## Core Workflow

1. Read the task prompt, `environment_access.md`, and `input/payloads/answer_template.json` completely.
2. Extract the base URL, target `case_id`, `task_id`, and any explicit observation window, target code, or protocol name from the prompt/template.
3. Fetch the case bundle first:

```bash
python scripts/fetch_clinic_bundle.py --base-url "$TASK_ENV_BASE_URL" --case-id "$CASE_ID"
```

The bundle endpoint usually contains `case`, `patient`, `findings`, `observations`, `medications`, `allergies`, `problems`, `imaging`, `sdoh`, and `care_registry`. If a field is absent or looks incomplete, cross-check the allowed list endpoints and filter by `case_id` and `patient_id`.
4. Fetch `/api/protocols` and the protocol matching `case.case_type`. Use `--all-protocols` with the helper when useful.