Individual skill

nv-segment-ctmr

Used for running NV-Segment-CTMR on CT or MRI NIfTI volumes and recording label-map evidence. Not for clinical interpretation.

skills/nv-segment-ctmr/SKILL.md

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Last checked: Nov 9, 2026

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Repository stars (not skill ratings): 3,922
Repository last updated: Nov 9, 2026
License: Apache-2.0

Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.

agent-skills Repository topic
agentic-ai Repository topic
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codex Repository topic
coding-agents Repository topic
cuda Repository topic
developer-tools Repository topic
llm Repository topic
omniverse Repository topic
medtech Declared skill tag
ct-mr Declared skill tag
segmentation Declared skill tag
engineering Derived category

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BENCHMARK.mddoc · 7,840 bytes
SKILL.mdcore · 9,272 bytes
SKILL.mdcore · 9,272 bytes
SKILL.mdcore · 9,272 bytes
SKILL.mdcore · 9,272 bytes
SKILL.mdcore · 9,272 bytes
evals/evals.jsonasset · 1,265 bytes
fixtures/README.mddoc · 575 bytes
scripts/run_ctmr.pyruns · 21,994 bytes
skill-card.mddoc · 4,168 bytes
skill.oms.sigasset · 5,745 bytes
skill_manifest.yamlasset · 7,215 bytes
tests/test_run_ctmr.pyruns · 4,479 bytes
validators/output_schema.jsonasset · 4,668 bytes

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# NV-Segment-CTMR

## Purpose
- Used for running NV-Segment-CTMR on CT or MRI NIfTI volumes and recording label-map evidence. Not for clinical interpretation.
- Use the wrapper exactly as documented; do not replace the upstream entrypoint with a handwritten implementation.
- Manifest I/O: inputs are `ct_or_mr_volume`; outputs are `label_map` and `result_json`.

## Instructions
- Read `skill_manifest.yaml` before changing arguments, side effects, or validation gates.
- Run `scripts/run_ctmr.py` through the documented command below; keep outputs under a caller-provided run directory.
- If a host agent exposes `run_script`, use `run_script("scripts/run_ctmr.py", args=[...])`; otherwise run the Bash/Python command shown below.
- Check the emitted JSON and paired verifier guidance before treating the run as evidence.

## Available Scripts