Individual skill
nv-generate-mr-brain
Used for generating synthetic T1, T2, FLAIR, SWI, or MRA brain MRI volumes with NV-Generate-CTMR MR-Brain v1. Not for production training data.
skills/nv-generate-mr-brain/SKILL.md
Source commit 25340619336e89bcc40365c28bfe9e790430468e
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- Last checked
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- Repository last updated
- Nov 6, 2026
- License
- Apache-2.0
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- agent-skills Repository topic
- agentic-ai Repository topic
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- codex Repository topic
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- cuda Repository topic
- developer-tools Repository topic
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- medtech Declared skill tag
- mri Declared skill tag
- brain Declared skill tag
- data Derived category
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BENCHMARK.mddoc · 8,184 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesSKILL.mdcore · 10,308 bytesevals/evals.jsonasset · 2,158 bytesfixtures/README.mddoc · 1,169 bytesfixtures/default_mri_t1.jsonasset · 298 bytesfixtures/mri_flair_skull_stripped.jsonasset · 295 bytesfixtures/mri_mra.jsonasset · 357 bytesfixtures/mri_t2.jsonasset · 272 bytesreferences/fov-and-downloads.mddoc · 2,022 bytesscripts/run_mr_brain.pyruns · 30,054 bytesskill-card.mddoc · 4,101 bytesskill.oms.sigasset · 6,969 bytesskill_manifest.yamlasset · 8,514 bytestests/test_run_mr_brain.pyruns · 9,433 bytesvalidators/output_schema.jsonasset · 6,356 bytes
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# NV-Generate-MR-Brain
## Purpose
- Used for generating synthetic T1, T2, FLAIR, SWI, or MRA brain MRI volumes with NV-Generate-CTMR rflow-mr-brain v1. Not for production training data.
- Use the wrapper exactly as documented; do not replace the upstream entrypoint with a handwritten implementation.
- Do not write custom inference code for normal runs. The wrapper owns config staging, output paths, and validation.
- Manifest I/O: inputs are `model_config_override`; outputs are `synthetic_mr_brain_volumes` and `result_json`.
## Instructions
- Read `skill_manifest.yaml` before changing arguments, side effects, or validation gates.
- Run `scripts/run_mr_brain.py` through the documented command below; keep outputs under a caller-provided run directory.
- If a host agent exposes `run_script`, use `run_script("scripts/run_mr_brain.py", args=[...])`; otherwise run the Bash/Python command shown below.
- For a command-shape review, do not install packages, clone repositories,
download weights, or start GPU inference. Emit only the exact wrapper command