Individual skill

pymol

Visualize, analyze, and render protein and molecular structures using PyMOL. Use when the user wants to create images of protein structures, perform structural alignments or superposition, measure distances or contacts, highlight binding sites or active site residues, color by B-factor/pLDDT, or analyze protein-ligand interactions. Do not use for docking, molecular dynamics, or sequence-only analysis.

packages/skills/skills/09_Cellular_Molecular_Neuroscience/pymol/SKILL.md

Source commit 93f685577b683843f2b1d851cd6dc5f7f1d89221

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Last checked

Nov 3, 2026

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