Individual skill
gnomad-database
Query the Genome Aggregation Database (gnomAD). Use when determining the rarity or allele frequency of specific genetic variants, retrieving gene constraint metrics (pLI, LOEUF) to assess loss-of-function intolerance, finding variants in a genomic region or gene, or querying structural variants. Don't use for analyzing individual patient genomes, tracking somatic mutations in cancer (use COSMIC), or requesting raw sequencing reads (use ENA).
packages/skills/skills/18_Genetics_Genomics/gnomad-database/SKILL.md
Source commit 93f685577b683843f2b1d851cd6dc5f7f1d89221
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- Yes
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Network or broad shell
- Last checked
- Nov 10, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
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Repository context
- Repository stars (not skill ratings)
- 1,072
- Repository last updated
- Nov 4, 2026
- License
- AGPL-3.0
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- data Derived category
- data-databases Derived category
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SKILL.mdcore · 3,098 bytesSKILL.mdcore · 3,098 bytesSKILL.mdcore · 3,098 bytesSKILL.mdcore · 3,098 bytesreferences/citation.bibasset · 5,197 bytesscripts/get_gene_constraint.pyruns · 2,465 bytesscripts/get_variant_frequency.pyruns · 4,326 bytesscripts/search_variants.pyruns · 5,360 bytes
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