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gtars

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High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.

skills/05-生物信息与基因组学/gtars/SKILL.md

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# Gtars: Genomic Tools and Algorithms in Rust

## Overview

Gtars is a high-performance Rust toolkit for manipulating, analyzing, and processing genomic interval data. It provides specialized tools for overlap detection, coverage analysis, tokenization for machine learning, and reference sequence management.

Use this skill when working with:
- Genomic interval files (BED format)
- Overlap detection between genomic regions
- Coverage track generation (WIG, BigWig)
- Genomic ML preprocessing and tokenization
- Fragment analysis in single-cell genomics
- Reference sequence retrieval and validation
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