Individual skill
omero-integration
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.
skills/13-实验室自动化与集成/omero-integration/SKILL.md
Source commit df5a498a81e0f9c8f79d814446dcf9e9b8f68888
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- No
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Not checked yet
- Last checked
- Nov 10, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 1,035
- Repository last updated
- Jul 20, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- academic Repository topic
- ai-assistant Repository topic
- arxiv Repository topic
- claude-code Repository topic
- google-scholar Repository topic
- literature-review Repository topic
- openclaw Repository topic
- paper-search Repository topic
- pubmed Repository topic
- skill Repository topic
- engineering Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 8,044 bytesSKILL.mdcore · 8,044 bytesSKILL.mdcore · 8,044 bytesSKILL.mdcore · 8,044 bytesSKILL.mdcore · 8,044 bytesSKILL.mdcore · 8,044 bytesreferences/advanced.mddoc · 15,013 bytesreferences/connection.mddoc · 8,404 bytesreferences/data_access.mddoc · 13,555 bytesreferences/image_processing.mddoc · 15,705 bytesreferences/metadata.mddoc · 17,020 bytesreferences/rois.mddoc · 16,388 bytesreferences/scripts.mddoc · 17,319 bytesreferences/tables.mddoc · 14,835 bytes
Read excerpt
# OMERO Integration
## Overview
OMERO is an open-source platform for managing, visualizing, and analyzing microscopy images and metadata. Access images via Python API, retrieve datasets, analyze pixels, manage ROIs and annotations, for high-content screening and microscopy workflows.
## When to Use This Skill
This skill should be used when:
- Working with OMERO Python API (omero-py) to access microscopy data
- Retrieving images, datasets, projects, or screening data programmatically
- Analyzing pixel data and creating derived images
- Creating or managing ROIs (regions of interest) on microscopy images
- Adding annotations, tags, or metadata to OMERO objects