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geniml

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Supports audited local Geniml genomic-interval workflows: validate BED and universe contracts, plan Region2Vec or scEmbed runs, inspect model/tokenizer compatibility, and assess consensus universes.

skills/geniml/SKILL.md

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# Geniml

Use Geniml for machine learning and statistical workflows over genomic interval
sets. Treat coordinates, assemblies, token vocabularies, model artifacts, and
sample grouping as explicit contracts. The bundled scripts validate or plan;
they do not import Geniml, contact services, deserialize models, or execute
training.

`Bash` is declared only for explicit, user-approved `uv`, Python, Geniml,
Gtars, Git, and native CLI commands shown in this guide; bundled Python helpers
do not spawn subprocesses. Example paths under `data/`, `refs/`, `work/`, and
`models/` are user-provided project placeholders, not missing bundled files.

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