Individual skill
paper2mcp
Convert Python, R, or command-line research repositories into tested MCP tools through useful tool selection, minimal wrappers around existing code, parallel specialists, and independent verification. Use for repository-to-MCP conversions and resumes; requires a host with agent spawning.
skills/paper2agent/paper2mcp/SKILL.md
Source commit 8c2d059165ef8cdcb70dbea76655b9c2b55b38e6
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- Yes
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Local scripts
- Last checked
- Nov 9, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 3,998
- Repository last updated
- Sep 17, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- research Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 6,082 bytesSKILL.mdcore · 6,082 bytesSKILL.mdcore · 6,082 bytesSKILL.mdcore · 6,082 bytesagents/openai.yamlasset · 262 bytesreferences/agents/cli/test-verifier-cli.mddoc · 679 bytesreferences/agents/cli/tutorial-executor-cli.mddoc · 685 bytesreferences/agents/cli/tutorial-scanner-cli.mddoc · 610 bytesreferences/agents/cli/tutorial-tool-extractor-cli.mddoc · 761 bytesreferences/agents/environment-python-manager.mddoc · 1,856 bytesreferences/agents/r/environment-r-manager.mddoc · 1,270 bytesreferences/agents/r/test-verifier-r.mddoc · 694 bytesreferences/agents/r/tutorial-executor-r.mddoc · 677 bytesreferences/agents/r/tutorial-scanner-r.mddoc · 625 bytesreferences/agents/r/tutorial-tool-extractor-r.mddoc · 703 bytesreferences/agents/test-verifier-improver.mddoc · 4,120 bytesreferences/agents/tutorial-executor.mddoc · 3,176 bytesreferences/agents/tutorial-scanner.mddoc · 2,990 bytesreferences/agents/tutorial-tool-extractor-implementor.mddoc · 5,640 bytesreferences/extensions.mddoc · 4,651 bytesreferences/language-routing.mddoc · 2,650 bytesreferences/orchestration.mddoc · 7,505 bytesreferences/output-delivery.mddoc · 5,646 bytesreferences/prompts/cli/mcp-integration.mddoc · 614 bytesreferences/prompts/cli/setup-and-discovery.mddoc · 624 bytesreferences/prompts/cli/tool-extraction-and-testing.mddoc · 645 bytesreferences/prompts/cli/tutorial-execution.mddoc · 623 bytesreferences/prompts/language-and-gpu-detection.mddoc · 462 bytesreferences/prompts/mcp-integration.mddoc · 1,850 bytesreferences/prompts/r/mcp-integration.mddoc · 566 bytesreferences/prompts/r/setup-and-discovery.mddoc · 576 bytesreferences/prompts/r/tool-extraction-and-testing.mddoc · 597 bytesreferences/prompts/r/tutorial-execution.mddoc · 575 bytesreferences/prompts/runtime-requirements.mddoc · 2,116 bytesreferences/prompts/setup-and-discovery.mddoc · 1,998 bytesreferences/prompts/tool-extraction-and-testing.mddoc · 2,476 bytesreferences/prompts/tutorial-execution.mddoc · 1,987 bytesreferences/prompts/usage-documentation.mddoc · 2,534 bytesreferences/routes/cli.mddoc · 7,902 bytesreferences/routes/r.mddoc · 9,271 bytesreferences/runtime-verification.mddoc · 3,989 bytesreferences/runtime.mddoc · 14,365 bytesreferences/tool-selection-and-wrapping.mddoc · 10,329 bytesreferences/workflow-state.mddoc · 15,034 bytesscripts/extract_notebook_images.pyruns · 7,661 bytesscripts/preprocess_notebook.pyruns · 2,686 bytesscripts/verify_mcp_server.pyruns · 11,208 bytesscripts/verify_workflow.pyruns · 25,569 bytes
Read excerpt
# Paper2MCP
Build a tested MCP server from a research repository. Select useful operations, bind each to an existing implementation, and expose it through a minimal wrapper. Scientific computation stays in the repository's code; the skill coordinates selection, execution, implementation, and verification.
## Start here
1. Obtain the repository URL or local checkout, output project directory, and any requested tasks, source/tutorial filter, or resource limits. Ask only for missing required inputs.
2. Read [orchestration](references/orchestration.md) for workspace setup, agent assignments, handoffs, and resume behavior.
3. Read [language and hardware routing](references/language-routing.md). Choose Python, R, or CLI by the interface being converted. Use the Python stages below or the [R](references/routes/r.md) / [CLI](references/routes/cli.md) route.
4. Apply [tool selection and minimal wrappers](references/tool-selection-and-wrapping.md) during scanning, implementation, and independent verification. Read [runtime requirements](references/runtime.md) when preparing environments and validating the server. Load only the current stage and relevant role instructions.
## Workflow
| Stage | Coordinator | Python specialists | Completion marker |