Individual skill
alphagenome-atlas-website-links
Constructs deep-links and URLs for the AlphaGenome Atlas website. Supports generating single-variant exploration links (1-based VCF-style coordinates), genomic locus views (1-based closed chr:start-end), candidate summary tables, and AlphaGenome reference vs. alternate predictions. Use when visualizing, exploring, charting, or linking genetic variants and genomic loci on the AlphaGenome Atlas, or when asked to inspect, view, or link predictions for a genomic variant. Don't use for computing raw AlphaGenome variant predictions directly without Atlas URLs (use alphagenome-single-variant-analysis or alphagenome-variant-impact-score).
skills/alphagenome_atlas_website_links/SKILL.md
Source commit 370f8f33e5bb27dffe8289ea9bdec436686613ce
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- Nov 11, 2026
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# AlphaGenome Atlas Deep-Linking & URL Configuration
Construct and validate deep-links for the AlphaGenome Atlas web application
(`https://deepmind.google.com/science/alphagenome/atlas`).
Base URL: `https://deepmind.google.com/science/alphagenome/atlas`
> [!IMPORTANT] **Mandatory Atlas Deep-Linking with Variant Scores**: Whenever
> presenting, discussing, or scoring genetic variants, you **MUST always provide
> clickable deep-links to the
> [AlphaGenome Atlas](https://deepmind.google.com/science/alphagenome/atlas)**.
> Use `scripts/alphagenome_atlas_links.py` to automate link and table
> generation.