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human-protein-atlas-database

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Use when you want to retrieve semi-quantitative protein expression and spatial localisation data from the Human Protein Atlas (HPA).

skills/human_protein_atlas_database/SKILL.md

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# Human Protein Atlas (HPA) Database Integration

This skill provides semi-quantitative protein expression and spatial
localisation data from the Human Protein Atlas (HPA). While RNA-seq (e.g., GTEx)
tells us if a gene is being transcribed, HPA confirms if the protein product
actually exists, where it is located within the cell (e.g. nucleus vs
cytoplasm), and its concentration in systemic blood circulation. The data is
based on Immunohistochemistry (IHC) across normal human tissues and cancer
types.

## Prerequisites

1.  **`uv`**: Read the `uv` skill and follow its Setup instructions to ensure
    `uv` is installed and on PATH.