Individual skill

arboreto

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

skills/arboreto/SKILL.md

Source commit b1f9b6e3306f8d870e23b2023057bf730090036f

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Network or broad shell

Last checked

Nov 9, 2026

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