Individual skill

scvi-tools

This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use this skill for probabilistic modeling, batch correction, dimensionality reduction, differential expression, cell type annotation, multimodal integration, and spatial analysis tasks.

skills/scvi-tools/SKILL.md

Source commit b1f9b6e3306f8d870e23b2023057bf730090036f

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Last checked

Nov 9, 2026

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