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cellagent-annotation

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README.mddoc · 1,563 bytes
SKILL.mdcore · 2,344 bytes
SKILL.mdcore · 2,344 bytes
SKILL.mdcore · 2,344 bytes
repo/.gitattributesasset · 170 bytes
repo/.gitignoreasset · 506 bytes
repo/CellTypeAgent/LLM.pyruns · 6,410 bytes
repo/CellTypeAgent/__init__.pyruns · 453 bytes
repo/CellTypeAgent/config.pyruns · 896 bytes
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repo/CellTypeAgent/data/GPTCellType/datasets/BCL.csvasset · 129 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/HCA.csvasset · 130 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/HCL.csvasset · 129 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/MCA.csvasset · 129 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/all.csvasset · 131 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/all_human.csvasset · 131 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/all_human_mixed.csvasset · 131 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/all_mouse.csvasset · 129 bytes
repo/CellTypeAgent/data/GPTCellType/datasets/coloncancer.csvasset · 128 bytes
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repo/CellTypeAgent/data/GPTCellType/datasets/lungcancer.csvasset · 129 bytes
repo/CellTypeAgent/data/GPTCellType/src/all.csvasset · 131 bytes
repo/CellTypeAgent/data/GPTCellType/src/compiled.csvasset · 131 bytes
repo/CellTypeAgent/data/GPTCellType/src/relation.csvasset · 129 bytes
repo/CellTypeAgent/data/Gene-Expression-Atlas.pngasset · 131 bytes
repo/CellTypeAgent/data/README.mddoc · 63,094 bytes
repo/CellTypeAgent/eval.pyruns · 9,162 bytes
repo/CellTypeAgent/get_expression_score.pyruns · 6,417 bytes
repo/CellTypeAgent/get_gene_summary.pyruns · 2,129 bytes
repo/CellTypeAgent/get_lit_review.pyruns · 20,281 bytes
repo/CellTypeAgent/get_prediction.pyruns · 9,389 bytes
repo/CellTypeAgent/get_selection.pyruns · 24,970 bytes
repo/CellTypeAgent/utils.pyruns · 12,249 bytes
repo/Figs/Fig_a - Results table like f2d in GPTCellType.ipynbruns · 129 bytes
repo/Figs/Fig_b - Average agreement score on all datasets accross different base models.ipynbruns · 129 bytes
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repo/Figs/g) Given mixed marker genes, to predict the mixed cell types (processed).pdfasset · 130 bytes
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