Individual skill

biopython

Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.

skills/biopython/SKILL.md

Source commit b1f9b6e3306f8d870e23b2023057bf730090036f

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Observed behavior

Network or broad shell

Last checked

Nov 9, 2026

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