Individual skill
pubmed-database
Search PubMed for scientific literature, including published clinical trials. Fetch abstracts and full text. Link published research to biological databases (gene, protein, nucleotide, PubChem) to discover associations between papers and specific compounds or genes. Verify medical spelling, match raw citations, and cache result sets for bulk processing. Interfaces NCBI E-utilities and PMC BioC APIs.
science-skills/pubmed_database/SKILL.md
Source commit 9a4b2db21fc4b217136ae4a0e6faad42d179ca03
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- No
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Not checked yet
- Last checked
- Nov 11, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 234
- Repository last updated
- Sep 18, 2026
- License
- Not available
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- data Derived category
- research Derived category
- data-databases Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesSKILL.mdcore · 8,774 bytesreferences/advanced-linking.mddoc · 5,520 bytesreferences/advanced-search.mddoc · 3,660 bytesreferences/bulk-workflows.mddoc · 3,599 bytesreferences/citation-matching.mddoc · 5,344 bytesreferences/cross-database-linking.mddoc · 4,025 bytesreferences/fetch-and-resolve.mddoc · 5,606 bytesreferences/search-and-discovery.mddoc · 4,948 bytesreferences/utilities.mddoc · 1,357 bytesscripts/pubmed_api.pyruns · 21,566 bytes
No licensed excerpt is available. You can inspect the pinned source.