Individual skill

pipeline-manifest

Build a traceability manifest linking analysis scripts to inputs, outputs, and manuscript figures or tables. Use when documenting a computational pipeline or locating the source of a reported artefact. Not for verifying that paper claims match code outputs; use the code-paper auditor.

skills/pipeline-manifest/SKILL.md

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# Pipeline Manifest

Build and maintain a `pipeline.md` that maps every script in a research project to its inputs, outputs, and the paper figures/tables it feeds. Optionally add structured headers to scripts that lack them.

## When to Use

- When starting a multi-step empirical project (establish the pipeline early)
- Before sharing code with coauthors (makes the data flow legible)
- Before submission (ensures the replication package is traceable)
- After inheriting or reviving old code (pair with `code-archaeology`)
- When you can't remember which script produces Figure 3

## When NOT to Use
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