Individual skill
article-data-fetcher
Given an article DOI or PubMed ID, discover and download the genomics data files deposited by the authors (VCF, FASTA, H5AD, CSV, JSON, BAM, etc.) from public repositories such as GEO, ENA, Zenodo, Figshare, Dryad, and OSF.
skills/article-data-fetcher/SKILL.md
Source commit df61706c3e32fea21ad88f5b8a5189c895f9524d
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- Yes
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Network or broad shell
- Last checked
- Nov 10, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 1,176
- Repository last updated
- Nov 9, 2026
- License
- NOASSERTION
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- ai-agents Repository topic
- bioinformatics Repository topic
- equity Repository topic
- genomics Repository topic
- local-first Repository topic
- openclaw Repository topic
- population-genetics Repository topic
- reproducibility Repository topic
- data-download Declared skill tag
- genomics Declared skill tag
- reproducibility Declared skill tag
- geo Declared skill tag
- ena Declared skill tag
- zenodo Declared skill tag
- data Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesSKILL.mdcore · 15,759 bytesWORKFLOW.mddoc · 3,799 bytesarticle_data_fetcher.pyruns · 42,428 bytestests/test_article_data_fetcher.pyruns · 3,279 bytes
No licensed excerpt is available. You can inspect the pinned source.