Individual skill
fastreer
Phylogenetic distance matrices and trees from VCF or FASTA data using the fastreeR hybrid Java/Python toolkit (VCF2TREE, VCF2DIST, DIST2TREE, FASTA2DIST).
skills/fastreer/SKILL.md
Source commit df61706c3e32fea21ad88f5b8a5189c895f9524d
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- No
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Not checked yet
- Last checked
- Nov 8, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
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Repository context
- Repository stars (not skill ratings)
- 1,175
- Repository last updated
- Nov 7, 2026
- License
- NOASSERTION
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- ai-agents Repository topic
- bioinformatics Repository topic
- equity Repository topic
- genomics Repository topic
- local-first Repository topic
- openclaw Repository topic
- population-genetics Repository topic
- reproducibility Repository topic
- phylogenetics Declared skill tag
- distance-matrix Declared skill tag
- tree-building Declared skill tag
- vcf Declared skill tag
- fasta Declared skill tag
- population-genomics Declared skill tag
- data Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
INTENTS.jsonasset · 700 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesSKILL.mdcore · 14,446 bytesexamples/demo_samples.vcfasset · 1,338 bytesexamples/demo_sequences.fastaasset · 350 bytesfastreer.pyruns · 24,303 bytestests/test_fastreer.pyruns · 5,769 bytes
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