Individual skill
nature-microbiology
Use when targeting Nature Microbiology (Nat Microbiol) or deciding whether a microbiology or microbial-ecology manuscript fits this venue. Encodes the journal's fit, framing, method-and-evidence bar, house style, official-submission re-check, and desk-reject heuristics.
English-NaturalScience-Journal-Skills/skills/nature-microbiology/SKILL.md
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- Last checked
- Nov 9, 2026
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- Sep 27, 2026
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- MIT
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# Nature Microbiology (nature-microbiology)
## Journal positioning
Nature Microbiology is Springer Nature's specialist journal for microbiology and microbial ecology in the broadest sense, covering bacteria, archaea, viruses, fungi, and protozoa across basic science, host-microbe interactions, environmental microbiology, and the microbiome. The journal requires a conceptual advance that moves the field — a new mechanism, a principle of microbial biology with broad implications, or a discovery that shifts understanding of a host-pathogen relationship or a microbial community process. Descriptive microbiology, incremental strain characterization, and applied microbiological improvements without mechanistic insight are out of scope. The readership spans microbiologists, virologists, infectious disease biologists, and microbial ecologists; papers must be written for this full community, not just specialists in one pathogen. This skill is a **fit / venue-selection / re-framing** tool. It does not replace the journal's current official submission guidelines. Before submitting, re-check the live author instructions on the Springer Nature Nature Microbiology site.
## When to trigger
- The author names Nature Microbiology as the target venue for a microbiology, virology, or microbial-ecology study.
- A host-pathogen, microbiome, or microbial-mechanism paper needs evaluation against the Nature Microbiology significance bar versus Cell Host & Microbe, Nature Immunology, or eLife.
- The author is deciding between Nature Microbiology and a more clinical venue (Lancet Infectious Diseases) for a study combining mechanism with epidemiological or clinical significance.
- The author needs Nature Microbiology's desk-reject criteria and a credible alternative-venue list.
## Scope & topic fit