Individual skill

bioconductor-geotcgadata

Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA) provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP and Copy number variation data. It's easy to download data from TCGA using the gdc tool, but processing these data into a format suitable for bioinformatics analysis requires more work. This R package was developed to handle these data.

skills/transcriptomics/geotcgadata/SKILL.md

Source commit c9bd4d8eb6edc5308a8f55e6184dce9e8afadf12

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Last checked

Nov 10, 2026

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