Individual skill
digital-pathology
Generate correct code for whole-slide image (WSI) analysis using TIAToolbox and foundation models (H-optimus-0, UNI, Prov-GigaPath). Triggers on requests involving whole-slide images, WSI, digital pathology, histopathology, SVS/NDPI/pyramidal TIFF, tissue segmentation, patch extraction, stain normalization, H-optimus-0, TIAToolbox, CAMELYON16/17, SlideGraph, MIL aggregation, HoVer-Net, PanNuke, or SageMaker deployment of pathology models. Produces deterministic commands and Python snippets for slide-info inspection, tissue masking, tile extraction at specified mpp, foundation-model feature embedding, slide-level aggregation, and regulated cloud inference.
skills/digital-pathology/SKILL.md
Source commit 4603541c396cdd845dbae554800a65132d12bb63
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- No
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Not checked yet
- Last checked
- Nov 7, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
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Repository context
- Repository stars (not skill ratings)
- 75
- Repository last updated
- Oct 7, 2026
- License
- MIT-0
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- agent-skills Repository topic
- claims-processing Repository topic
- drug-discovery Repository topic
- genomics Repository topic
- medical-imaging Repository topic
- risk-adjustment Repository topic
- healthcare-agent-skills Repository topic
- life-sciences-agent-skills Repository topic
- medical-coding Repository topic
- real-world-evidence Repository topic
- skill Declared skill tag
- category:pipeline Declared skill tag
- digital-pathology Declared skill tag
- tiatoolbox Declared skill tag
- h-optimus-0 Declared skill tag
- whole-slide-image Declared skill tag
- hcls Declared skill tag
- devops Derived category
Files and excerpt
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Browse files
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