Individual skill

multi-omics-integration

Reasoning skill for multi-omics data integration strategy selection. Use when the user asks to integrate transcriptomics with proteomics, combine multi-omic layers, choose between early intermediate or late integration, apply batch correction across omics, handle partial sample overlap, run MOFA+ or iCluster, interpret multi-omic factors, select enrichment methods for multi-omic signatures, or decide how to merge genomics epigenomics transcriptomics proteomics and metabolomics data. Triggers include "multi-omics integration", "combine omics layers", "early vs late fusion", "MOFA+", "iCluster", "batch correction across omics", "partial overlap", "multi-omic enrichment", "kernel integration", "concatenation vs stacking", "SNF", "similarity network fusion", "intermediate integration", "multi-omic factor analysis".

skills/multi-omics-integration/SKILL.md

Source commit 4603541c396cdd845dbae554800a65132d12bb63

What was checked

Matches the observed repository HEAD

Yes

Scanner rules are current

Yes

Repository scan complete

No

Skill scan complete

Yes

Observed behavior

Instructions only

Last checked

Nov 11, 2026

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