Individual skill

replicate-study

Use when applying a published cohort study's methodology to a different database. Extracts the design from the source paper, maps variables to the target database with a harmonization table, generates the analysis code and reports every forced deviation.

skills/replicate-study/SKILL.md

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# Replicate Study Skill

Apply a published study's methodology to a different database and report every place the target
database forced a deviation.

## Inputs

1. **Source paper**: PDF, DOI, or markdown of the paper to replicate
2. **Target database path**: CSV/SAS data file(s) to use
3. **Harmonization table** (optional): CSV mapping source → target variables
   - Default: `${CLAUDE_SKILL_DIR}/references/harmonization_knhanes_nhanes.csv` (if KNHANES↔NHANES)

## Reference Files
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