Individual skill
find-cohort-gap
Use when looking for research topics a longitudinal cohort database can answer (NHIS, UK Biobank, an institutional EMR or registry). Profiles the cohort, matches PI expertise, scans literature saturation and returns ranked topic proposals with gap evidence.
skills/find-cohort-gap/SKILL.md
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- Last checked
- Nov 7, 2026
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Repository context
- Repository stars (not skill ratings)
- 375
- Repository last updated
- Nov 2, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- biostatistics Repository topic
- claude-code Repository topic
- claude-skills Repository topic
- clinical-research Repository topic
- diagnostic-accuracy Repository topic
- literature-review Repository topic
- manuscript Repository topic
- medical-ai Repository topic
- medical-research Repository topic
- meta-analysis Repository topic
- research Derived category
- data Derived category
- data-databases Derived category
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SKILL.mdcore · 11,793 bytesSKILL.mdcore · 11,793 bytesSKILL.mdcore · 11,793 bytesSKILL.mdcore · 11,793 bytesSKILL.mdcore · 11,793 bytesreferences/cohort_profile_template.mddoc · 4,219 bytesreferences/onepager_template.mddoc · 2,809 bytesreferences/pattern_scoring_rubric.mddoc · 6,603 bytesreferences/saturation_query_templates.mddoc · 4,294 bytesscripts/build_cohort_profile.pyruns · 27,759 bytesskill.ymlasset · 2,147 bytestests/test_cohort_profile.shruns · 12,253 bytes
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# Find-Cohort-Gap Skill
Output directory: user-specified (default: current working directory).
## Phase 0: Cohort Intake
The cohort does not have to be one this skill has heard of. Route on what the user
actually has.
| The user has… | Do this |
|---------------|---------|
| A **named public cohort** (NHIS, UK Biobank, KNHANES, …) | Fill the profile from published documentation. Cite the source for every field. |
| A **codebook / data dictionary / CSV export** of their own registry or EMR extract | Run the input adapter below. This is the common case — an institutional registry or single-centre export that no public documentation describes. |
| A **review, guideline, or preprint** defining the clinical domain | Attach it as domain context (`--context`), as a file or a URL. |