Individual skill
tooluniverse-literature-deep-research
Conduct comprehensive literature research with target disambiguation, evidence grading, and structured theme extraction. Creates a detailed report with mandatory completeness checklist, biological model synthesis, and testable hypotheses. For biological targets, resolves offic...
scientific-skills/Evidence Insight/tooluniverse-literature-deep-research/SKILL.md
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- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- research Derived category
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EXAMPLES.mddoc · 16,481 bytesPOLISH_CHANGELOG.mddoc · 678 bytesQUICK_REFERENCE.mddoc · 6,208 bytesREADME.mddoc · 7,602 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesSKILL.mdcore · 33,376 bytesTOOL_NAMES_REFERENCE.mddoc · 10,576 byteseval_report_tooluniverse-literature-deep-research_result.jsonasset · 11,031 bytes
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> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
# Literature Deep Research Strategy (Enhanced)
A systematic approach to comprehensive literature research that **starts with target disambiguation** to prevent missing details, uses **evidence grading** to separate signal from noise, and produces a **content-focused report** with mandatory completeness sections.
**KEY PRINCIPLES**:
1. **Target disambiguation FIRST** - Resolve IDs, synonyms, naming collisions before literature search
2. **Right-size the deliverable** - Use *Factoid / Verification Mode* for single, answerable questions; use full report mode for “deep research”
3. **Report-first output** - Default deliverable is a report file; an inline answer is allowed (and recommended) for Factoid / Verification Mode
4. **Evidence grading** - Grade every claim by evidence strength (mechanistic paper vs screen hit vs review vs text-mined)
5. **Mandatory completeness** - All checklist sections must exist, even if "unknown/limited evidence"
6. **Source attribution** - Every piece of information traceable to database/tool
7. **English-first queries** - Always use English terms for literature searches and tool calls, even if the user writes in another language. Only try original-language terms as a fallback if English returns no results. Respond in the user's language