Individual skill
phi-prompt-guard
Runtime, prompt-time behavioral guardrail that helps reduce PHI exposure in LLM-assisted workflows by detecting PHI-bearing prompts, avoiding unsafe tool actions that would pull more PHI in, and redirecting users toward de-identified or synthetic inputs. Use when the user is about to paste, query, or read clinical/patient data, or when an action (DB query, file read, tool output) may pull PHI into the conversation. Honors a [PHI-OK] attestation for synthetic / test data.
scientific-skills/Other/phi-prompt-guard/SKILL.md
Source commit 686e09dfdb45d9fa1a08664f06bb93769b3c9d91
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- Last checked
- Nov 9, 2026
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- 2,048
- Repository last updated
- Sep 17, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- testing Derived category
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SKILL.mdcore · 16,750 bytesSKILL.mdcore · 16,750 byteseval_report_phi-prompt-guard_result.jsonasset · 12,154 bytesphi-prompt-guard_structural_precheck.jsonasset · 2,083 bytes
Read excerpt
> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
> **Contributed by**: [@ndu-bioinfo](https://github.com/ndu-bioinfo)
# PHI Prompt Guard
A behavioral skill that instructs the agent to refuse, redact, or redirect when the live prompt — or an action the agent is about to take — would push more Protected Health Information (PHI) into the LLM context window. Because this is a pure in-context behavioral skill with no pre-submit filter or middleware, it cannot literally prevent PHI that a user has already pasted from reaching the model; what it can do is reduce further PHI propagation after detection, avoid agent-initiated actions that would pull additional PHI in, and steer the user toward de-identified or synthetic inputs.
Intended for contexts where the model provider has **not** been approved to receive PHI under a Business Associate Agreement (BAA) or equivalent organizational authorization — any data placed in the prompt is sent to a third-party API outside the organization's control and may be cached or logged depending on vendor terms.
## When to Use
- The user pastes (or is about to paste) clinical, patient, or specimen data into the conversation.
- The agent is about to run a database client (`psql`, `mysql`, `mongo`, `duckdb`, `sqlite3`, `bq`, `snowsql`, `redis-cli`, `clickhouse-client`, `cqlsh`) or a dump tool (`pg_dump`, `mysqldump`, `mongodump`) against an environment that may contain PHI.
- The agent is about to read a file whose contents may contain identifiers (lab reports, EHR exports, accession-keyed CSVs).
- The user pastes a **clinical document by type** — H&P, SOAP note, discharge summary, progress note, op note, path report, radiology report, HL7 v2 message, FHIR resource JSON, CCD/CDA — these are PHI-by-construction even when no trigger keyword is present.