Individual skill
text-format-organizer
A local text formatting organizer for biomedical/academic writing; use it when you need to clean whitespace/line endings while preserving Markdown structures or when normalizing .docx/.md/.txt before submission or proofreading.
scientific-skills/Other/text-format-organizer/SKILL.md
Source commit 686e09dfdb45d9fa1a08664f06bb93769b3c9d91
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- Yes
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Instructions only
- Last checked
- Nov 9, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 2,042
- Repository last updated
- Sep 17, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- writing Derived category
- research Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
POLISH_CHANGELOG.mddoc · 599 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 bytesSKILL.mdcore · 7,719 byteseval_report_text-format-organizer_result.jsonasset · 10,924 bytes
Read excerpt
> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
## Validation Shortcut
Run this minimal command first to verify the supported execution path:
```bash
python scripts/init_run.py --help
```
## When to Use
- Cleaning biomedical manuscripts where extra blank lines, trailing spaces, or mixed line endings break journal templates.
- Normalizing Markdown notes (lists/tables/code blocks) before converting to PDF/Word.
- Formatting clinical research reports or protocol records exported from multiple editors (Windows/macOS/Linux).