Individual skill
biodbnet-api
Access bioDBnet REST services for biological identifier conversion, pathway retrieval, and ortholog mapping. Use when you need to convert gene/protein IDs, find pathways, or retrieve biological annotations via bioDBnet.
scientific-skills/Other/biodbnet-api/SKILL.md
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- Last checked
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- Repository last updated
- Sep 17, 2026
- License
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- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- engineering Derived category
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SKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesSKILL.mdcore · 6,169 bytesbiodbnet-api_audit_result_v2.jsonasset · 12,510 bytesreferences/api_methods.mddoc · 2,054 bytesscripts/biodbnet_client.pyruns · 1,847 bytes
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> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
# bioDBnet API Skill
This skill provides access to bioDBnet (biological Database network) REST web services. It allows for integrating biological data from multiple databases, converting identifiers, and retrieving pathway or ortholog information.
## When to Use
- Use this skill when the request matches its documented task boundary.
- Use it when the user can provide the required inputs and expects a structured deliverable.
- Prefer this skill for repeatable, checklist-driven execution rather than open-ended brainstorming.
## Key Features
- Scope-focused workflow aligned to: Access bioDBnet REST services for biological identifier conversion, pathway retrieval, and ortholog mapping. Use when you need to convert gene/protein IDs, find pathways, or retrieve biological annotations via bioDBnet.