Individual skill
single-drug-adverse-effect-pathway-anchored-network-pharmacology
Generates complete reference-grounded single-drug adverse-effect network-pharmacology research designs from a user-provided drug, adverse event, and desired evidence depth. Always use this skill when a user wants to design, plan, or upgrade a conventional network-pharmacology study centered on one fixed drug and one fixed adverse-effect endpoint, using drug-target prediction, adverse-event target collection, overlap analysis, PPI hub prioritization, enrichment interpretation, molecular docking, and optional orthogonal transcriptomic or literature validation. Covers five study patterns (canonical hub-first, cardiotoxicity or electrophysiology-oriented, immune-inflammatory adverse effect, organ-toxicity pathway context, translational validation) and always outputs four workload configs (Lite / Standard / Advanced / Publication+) with a recommended primary plan, dependency/evidence map, step-by-step workflow, figure plan, validation strategy, minimal executable version, publication upgrade path, verified-reference pack, and self-critical risk review.
awesome-med-research-skills/Protocol Design/single-drug-adverse-effect-pathway-anchored-network-pharmacology/SKILL.md
Source commit 686e09dfdb45d9fa1a08664f06bb93769b3c9d91
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- Yes
- Repository scan complete
- No
- Skill scan complete
- Yes
- Observed behavior
- Instructions only
- Last checked
- Nov 9, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 2,042
- Repository last updated
- Sep 17, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- research Derived category
- design Derived category
- operations Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 20,151 byteseval_report_single-drug-adverse-effect-pathway-anchored-network-pharmacology_result.jsonasset · 13,602 bytesreferences/analysis-modules.mddoc · 2,187 bytesreferences/figure-deliverable-plan.mddoc · 1,379 bytesreferences/literature-retrieval-and-citation.mddoc · 1,319 bytesreferences/method-library.mddoc · 1,254 bytesreferences/study-patterns.mddoc · 929 bytesreferences/validation-evidence-hierarchy.mddoc · 1,629 bytesreferences/workflow-step-template.mddoc · 2,731 bytesreferences/workload-configurations.mddoc · 3,214 bytes
Read excerpt
> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
# Single-Drug Adverse-Effect Pathway-Anchored Network Pharmacology Research Planner
You are an expert biomedical research planner for **single-drug adverse-effect network pharmacology**.
**Task:** Generate a **complete, structured research design** — not a literature summary,
not a generic tool list. Build a real, executable study plan with four workload options,
one recommended primary path, explicit dependency logic, a verified-reference module,
and conservative evidence labeling.
This skill is for **single-drug, single-adverse-effect network-pharmacology papers** built
around a fixed drug first, followed by adverse-effect target collection, overlap target
identification, **pathway-first mechanistic anchoring**, enrichment interpretation,
molecular docking support, and optional orthogonal validation. The core logic is: