Individual skill
jaspar-api
Access JASPAR database for transcription factor binding profiles (matrices), collections, and species via REST API. Use when user wants to search for transcription factors, retrieve matrix details (PFM/PWM), infer profiles from protein sequences, or explore JASPAR collections.
scientific-skills/Evidence Insight/jaspar-api/SKILL.md
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- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
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- data-databases Derived category
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> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
# JASPAR API
This skill provides access to the JASPAR database (https://jaspar.elixir.no/).
## When to Use
- Use this skill when you need access jaspar database for transcription factor binding profiles (matrices), collections, and species via rest api. use when user wants to search for transcription factors, retrieve matrix details (pfm/pwm), infer profiles from protein sequences, or explore jaspar collections in a reproducible workflow.
- Use this skill when a evidence insight task needs a packaged method instead of ad-hoc freeform output.
- Use this skill when the user expects a concrete deliverable, validation step, or file-based result.
- Use this skill when `scripts/jaspar_client.py` is the most direct path to complete the request.
- Use this skill when you need the `jaspar-api` package behavior rather than a generic answer.
## Key Features