Individual skill
cerna-analysis
Use when building a ceRNA regulatory network from a key gene list by combining bundled miRNA-mRNA and miRNA-lncRNA database files, with flat-file CSV exports and PDF visualization in a single output directory. NOT for: differential expression, single-cell analysis, enrichment analysis, or workflows without a key gene list.
awesome-med-research-skills/Data Analysis/cerna-analysis/SKILL.md
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- Last checked
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- Sep 17, 2026
- License
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- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- data Derived category
- data-databases Derived category
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Read excerpt
# ceRNA Analysis
## When to Use
Use this skill when you need to construct a ceRNA regulatory network from a known key-gene list using the bundled miRNA-mRNA and miRNA-lncRNA reference tables.
Use it for:
- Building a ceRNA network from one gene list and exporting flat CSV plus PDF outputs
- Comparing supported miRNA source modes such as `combined`, `starbase`, or pairwise overlaps
- Re-running the same local workflow with different lncRNA strictness, layout, or plotting parameters
Do not use it for:
