Individual skill
pubmed-database
Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.
scientific-skills/Evidence Insight/pubmed-database/SKILL.md
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- bioinformatics Repository topic
- computational-biology Repository topic
- data-analysis Repository topic
- ai Repository topic
- biology Repository topic
- cancer-genomics Repository topic
- data-visualization Repository topic
- differential-expression Repository topic
- genomics Repository topic
- medical Repository topic
- data Derived category
- data-databases Derived category
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POLISH_CHANGELOG.mddoc · 633 bytesSKILL.mdcore · 16,109 bytesSKILL.mdcore · 16,109 bytesSKILL.mdcore · 16,109 byteseval_report_pubmed-database_result.jsonasset · 10,943 bytesreferences/api_reference.mddoc · 8,232 bytesreferences/common_queries.mddoc · 11,178 bytesreferences/search_syntax.mddoc · 10,708 bytes
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> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
# PubMed Database
## Overview
PubMed is the U.S. National Library of Medicine's comprehensive database providing free access to MEDLINE and life sciences literature. Construct advanced queries with Boolean operators, MeSH terms, and field tags, access data programmatically via E-utilities API for systematic reviews and literature analysis.
## When to Use This Skill
This skill should be used when:
- Searching for biomedical or life sciences research articles
- Constructing complex search queries with Boolean operators, field tags, or MeSH terms
- Conducting systematic literature reviews or meta-analyses