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circos-plot-generator

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Generate Circos configuration files for circular genomics data visualization. Supports genomic variations (SNPs, CNVs, structural variants), cell-cell communication networks, and custom track configurations for publication-ready circular plots.

scientific-skills/Data Analysis/circos-plot-generator/SKILL.md

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> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)

# Circos Plot Generator

Generate configuration files for Circos circular visualization plots, enabling genomics data visualization including genomic variations, chromosome ideograms, cell-cell communication networks, and custom track annotations. Simplifies the complex Circos configuration process for researchers without Perl expertise.

**Key Capabilities:**
- **Genomic Variation Visualization**: Create plots for SNPs, CNVs, structural variants (translocations, inversions)
- **Cell-Cell Communication Networks**: Visualize intercellular interactions and signaling pathways
- **Chromosome Ideograms**: Display chromosome structure with bands and annotations
- **Multiple Track Types**: Support histograms, scatter plots, links, heatmaps, and text tracks
- **Publication-Ready Output**: Generate configurations for high-quality PNG/SVG figures

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