Individual skill

tooluniverse-proteomics-analysis

Analyze mass spectrometry proteomics data including protein quantification, differential expression, post-translational modifications (PTMs), and protein-protein interactions. Processes MaxQuant, Spectronaut, DIA-NN, and other MS platform outputs. Performs normalization, statistical analysis, pathway enrichment, and integration with transcriptomics. Use when analyzing proteomics data, comparing protein abundance between conditions, identifying PTM changes, studying protein complexes, integrating protein and RNA data, discovering protein biomarkers, or conducting quantitative proteomics experiments.

skills/bio/tooluniverse-proteomics-analysis/SKILL.md

Source commit df378022e8b0764e5ee07df3e3a03e2fa7c7dd65

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Yes

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Observed behavior

Network or broad shell

Last checked

Nov 4, 2026

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