Individual skill

pubmed-database

Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.

backend/cli/skills/databases/pubmed-database/SKILL.md

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Last checked: Nov 2, 2026

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Repository stars (not skill ratings): 4,350
Repository last updated: Nov 4, 2026
License: Apache-2.0

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# PubMed Database

## Overview

PubMed is the U.S. National Library of Medicine's comprehensive database providing free access to MEDLINE and life sciences literature. Construct advanced queries with Boolean operators, MeSH terms, and field tags, access data programmatically via E-utilities API for systematic reviews and literature analysis.

## When to Use This Skill

This skill should be used when:
- Searching for biomedical or life sciences research articles
- Constructing complex search queries with Boolean operators, field tags, or MeSH terms
- Conducting systematic literature reviews or meta-analyses
- Accessing PubMed data programmatically via the E-utilities API
- Finding articles by specific criteria (author, journal, publication date, article type)