Individual skill
hmdb-database
Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties, biomarker data, NMR/MS spectra, pathways, for metabolomics and identification.
backend/cli/skills/databases/hmdb-database/SKILL.md
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- Last checked
- Nov 2, 2026
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- License
- Apache-2.0
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SKILL.mdcore · 8,294 bytesSKILL.mdcore · 8,294 bytesreferences/hmdb_data_fields.mddoc · 8,736 bytes
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# HMDB Database
## Overview
The Human Metabolome Database (HMDB) is a comprehensive, freely available resource containing detailed information about small molecule metabolites found in the human body.
## When to Use This Skill
This skill should be used when performing metabolomics research, clinical chemistry, biomarker discovery, or metabolite identification tasks.
## Database Contents
HMDB version 5.0 (current as of 2025) contains:
