Individual skill
locus-to-gene-mapper-skill
Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open Targets L2G/coloc -> eQTL -> burden/coding context), with reproducible tables and optional figures. Use when a user provides a trait/EFO term and/or lead variants and needs locus-to-gene prioritization for downstream biology decisions.
plugins/life-science-research/skills/locus-to-gene-mapper-skill/SKILL.md
Source commit b767f8fa3be1a22b093127dd59956c91ecffca9d
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- Last checked
- Nov 6, 2026
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- Repository last updated
- Nov 3, 2026
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SKILL.mdcore · 12,153 bytesSKILL.mdcore · 12,153 bytesSKILL.mdcore · 12,153 bytesSKILL.mdcore · 12,153 bytesSKILL.mdcore · 12,153 bytesSKILL.mdcore · 12,153 bytesagents/openai.yamlasset · 113 bytesscripts/map_locus_to_gene.pyruns · 79,824 bytesscripts/test_map_locus_to_gene.pyruns · 5,903 bytes
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