Individual skill

metabolomics

ToolUniverse workflow — Metabolomics

skills/metabolomics/SKILL.md

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---
name: tooluniverse-metabolomics
description: Comprehensive metabolomics research skill for identifying metabolites, analyzing studies, and searching metabolomics databases. Integrates HMDB (220k+ metabolites), MetaboLights, Metabolomics Workbench, and PubChem. Use when asked to identify or annotate metabolites (HMDB IDs, chemical properties, pathways), retrieve metabolomics study information from MetaboLights (MTBLS*) or Metabolomics Workbench (ST*), search for studies by keywords or disease, or generate comprehensive metabolomics research reports.
---

# Metabolomics Research

Comprehensive metabolomics research skill that identifies metabolites, analyzes studies, and searches metabolomics databases. Generates structured research reports with annotated metabolite information, study details, and database statistics.

## Use Case

**Use this skill when asked to:**
- Identify or annotate metabolites (HMDB IDs, chemical properties, pathways)
- Retrieve metabolomics study information from MetaboLights or Metabolomics Workbench