Individual skill

jaspar-database

JASPAR 2024 TF binding profiles via REST API and pyJASPAR. Retrieve PFMs/PWMs by TF name, JASPAR ID, species, or structural class. Scan DNA for TFBS; browse by taxon (human, mouse) or TF family (bHLH, zinc finger). Use for motif enrichment input, TFBS scanning, and regulatory sequence analysis. For ChIP-seq peak motif discovery use homer-motif-analysis; for regulatory variant scoring use regulomedb-database.

skills/genomics-bioinformatics/databases/jaspar-database/SKILL.md

Source commit 55c1bd3e863d11bf5a853d24bcdda10c88e6eddf

What was checked

Matches the observed repository HEAD

Yes

Scanner rules are current

Yes

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No

Observed behavior

Network or broad shell

Last checked

Nov 5, 2026

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