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ml-training-recipes

Battle-tested PyTorch training recipes for all domains — LLMs, vision, diffusion, medical imaging, protein/drug discovery, spatial omics, genomics. Covers training loops, optimizer selection (AdamW, Muon), LR scheduling, mixed precision, debugging, and systematic experimentation. Use when training or fine-tuning neural networks, debugging loss spikes or OOM, choosing architectures, or optimizing GPU throughput.

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# ML Training Recipes

Battle-tested patterns for PyTorch training across domains. Drawn from production codebases
(Karpathy's autoresearch/nanochat, torchvision, HuggingFace) and modern training practice.

## Reference files (read when needed)

- `references/architecture.md` — Transformer/LLM architecture code patterns, weight init
- `references/optimizers.md` — Muon, AdamW hybrid, per-group LR, compiled optimizer steps
- `references/domain-specific.md` — Vision, diffusion, contrastive, distributed, checkpointing, data loading
- `references/scaling-and-selection.md` — Scaling laws, compute budget tables, decision trees, DGX Spark
- `references/biomedical.md` — Drug discovery, protein models, medical imaging, genomics, clinical NLP
- `references/experiment-loop.md` — Autonomous experiment loop (autoresearch keep/discard/revert)