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unibind-database

Queries the UniBind database for experimentally validated transcription factor (TF) binding sites. Use when retrieving direct TF-DNA interaction datasets, downloading binding site coordinates (BED/FASTA) for local analysis, or listing available datasets by species, cell line, or TF name. Don't use to query specific intervals, locations, genes, motif models or expression data.

skills/unibind_database/SKILL.md

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# UniBind Database Skill

UniBind is a database of direct TF–DNA interactions across 9 species,
integrating ChIP-seq peaks with JASPAR TF binding profiles via the DAMO
framework.

## Prerequisites

1.  **`uv`**: Read the `uv` skill and follow its Setup instructions to ensure
    `uv` is installed and on PATH.
2.  **User Notification**: If .licenses/unibind_database_LICENSE.txt does not
    already exist in the workspace root directory then (1) prominently notify
    the user to check the terms at https://unibind.uio.no/ and
    https://unibind.uio.no/api/overview, then (2) create the file recording the