Individual skill
pyhealth
Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, drug recommendation), medical coding systems (ICD, NDC, ATC), physiological signals (EEG, ECG), healthcare datasets (MIMIC-III/IV, eICU, OMOP), or implementing deep learning models for healthcare applications (RETAIN, SafeDrug, Transformer, GNN).
cli-tool/components/skills/scientific/pyhealth/SKILL.md
Source commit ad81bf053f80b626801decf425f501ba49983d98
What was checked
- Matches the observed repository HEAD
- Yes
- Scanner rules are current
- No
- Repository scan complete
- No
- Skill scan complete
- No
- Observed behavior
- Not checked yet
- Last checked
- Nov 4, 2026
These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.
Install this skill
Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.
An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.
Repository context
- Repository stars (not skill ratings)
- 33,202
- Repository last updated
- Nov 8, 2026
- License
- MIT
Observed agent integration: No specific integration evidence. Standard SKILL.md installation does not imply verified compatibility.
- anthropic Repository topic
- anthropic-claude Repository topic
- claude Repository topic
- claude-code Repository topic
- agent-skills Repository topic
- ai-agents Repository topic
- claude-code-plugins Repository topic
- cli Repository topic
- mcp Repository topic
- registry Repository topic
- engineering Derived category
- data Derived category
- testing Derived category
- education Derived category
Files and excerpt
File metadata and permitted, redacted excerpts come from the recorded scan. Source links are pinned to that commit.
Browse files
SKILL.mdcore · 17,590 bytesSKILL.mdcore · 17,590 bytesSKILL.mdcore · 17,590 bytesSKILL.mdcore · 17,590 bytesSKILL.mdcore · 17,590 bytesSKILL.mdcore · 17,590 bytesreferences/datasets.mddoc · 5,468 bytesreferences/medical_coding.mddoc · 8,476 bytesreferences/models.mddoc · 13,776 bytesreferences/preprocessing.mddoc · 14,388 bytesreferences/tasks.mddoc · 11,404 bytesreferences/training_evaluation.mddoc · 16,982 bytes
Read excerpt
# PyHealth: Healthcare AI Toolkit
## Overview
PyHealth is a comprehensive Python library for healthcare AI that provides specialized tools, models, and datasets for clinical machine learning. Use this skill when developing healthcare prediction models, processing clinical data, working with medical coding systems, or deploying AI solutions in healthcare settings.
## When to Use This Skill
Invoke this skill when:
- **Working with healthcare datasets**: MIMIC-III, MIMIC-IV, eICU, OMOP, sleep EEG data, medical images
- **Clinical prediction tasks**: Mortality prediction, hospital readmission, length of stay, drug recommendation
- **Medical coding**: Translating between ICD-9/10, NDC, RxNorm, ATC coding systems
- **Processing clinical data**: Sequential events, physiological signals, clinical text, medical images