Individual skill

biostudies-fetch

Query metadata and download data from EMBL-EBI BioStudies, the database that describes biological studies and links their data across collections (ArrayExpress, BioImages, BioModels, EGA-linked studies and standalone submissions). Fetch study metadata by accession, list and download attached files, search across collections, and write a harmonised metadata.tsv.

skills/biostudies-fetch/SKILL.md

Source commit df61706c3e32fea21ad88f5b8a5189c895f9524d

What was checked

Matches the observed repository HEAD

Yes

Scanner rules are current

Yes

Repository scan complete

No

Skill scan complete

No

Observed behavior

Network or broad shell

Last checked

Nov 8, 2026

These are observations at the recorded commit, not a guarantee of safety. Review the source before running it.

Install this skill

Choose an agent in your Stack or copy a command below. Commands fetch the pinned commit and copy only this skill directory. Existing destinations are refused. Copying a command does not install anything.

An install command is unavailable: current rules, complete repository and skill scans, an eligible behavior level and a permitted license are required.